Answer to Question #154924 in Bioinformatics for vaibhav

Question #154924

(a) Find the sum-of-pairs score for a given alignment. Use the following scoring function for this program: 4 points for a match, -1 points for a mismatch, -2 for a s(-,base) or s(base,-) and 0 for a s(-,-).

A-G

AC-

TCG

(b) What is the Jukes-Cantor distance model and why is it more appropriate than a simple model that merely counts the number of mismatches?


1
Expert's answer
2021-01-28T05:02:29-0500
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